PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27122.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 301aa    MW: 33617.9 Da    PI: 9.1203
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27122.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind309.41.2e-941130127301
   GAGA_bind  27 qlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvgvqvlsgtksidslqqlsepqled 121
                   m+++aerda+irern+al e+k a+aerdma lqrd+alaern+ + erd++++al l++ s++      +++g ++ sg+k+i   qq  ++ +++
  PHU27122.1  11 TYMAIMAERDAAIRERNMALEERKRAFAERDMAMLQRDAALAERNALIQERDDAIAALRLQDSSTNdnnmVPDSPGNGTESGAKHIYIQQQ-MHRTIAE 108
                 569******************************************************9998887776644445577888889999985555.5555555 PP

   GAGA_bind 122 save.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader..................skaekksidlvlngv 201
                  a + +++      +    + ++++e+k +kk +r+k+ +++k+ k  + s++  ++ +++   ++                  + +++k  +l+ln++
  PHU27122.1 109 AAHGsMKDPTAG--YL---KDTNTSEAKVPKKVRRPKESRHNKQAKIPRVSKNGAESLNMQVIATTsddwanlqemdsdkdgdtQLTSWK-DNLGLNQI 201
                 555522222211..11...12223333333333344444444444333333333333333333322334455555666666663555565.59****** PP

   GAGA_bind 202 slDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvti 300
                 ++Des++PvPvCsCtG+++ CYkWG GGWqSaCCtttiS+yPLP+ +++r +R++grKmS+gaf+klL++Laa+Gydls p+DLkdhWAkHGtn++ t+
  PHU27122.1 202 NFDESAMPVPVCSCTGTPQPCYKWGHGGWQSACCTTTISMYPLPQISNKRYSRVGGRKMSGGAFSKLLNRLAAQGYDLSIPLDLKDHWAKHGTNRYSTL 300
                 ************************************************************************************************998 PP

   GAGA_bind 301 r 301
                 +
  PHU27122.1 301 K 301
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
IKDHNNFTIK TYMAIMAERD AAIRERNMAL EERKRAFAER DMAMLQRDAA LAERNALIQE  60
RDDAIAALRL QDSSTNDNNM VPDSPGNGTE SGAKHIYIQQ QMHRTIAEAA HGSMKDPTAG  120
YLKDTNTSEA KVPKKVRRPK ESRHNKQAKI PRVSKNGAES LNMQVIATTS DDWANLQEMD  180
SDKDGDTQLT SWKDNLGLNQ INFDESAMPV PVCSCTGTPQ PCYKWGHGGW QSACCTTTIS  240
MYPLPQISNK RYSRVGGRKM SGGAFSKLLN RLAAQGYDLS IPLDLKDHWA KHGTNRYSTL  300
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.22e-83BBR-BPC family protein