PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27111.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 211aa MW: 23381 Da PI: 8.0725

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.3	2.8e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H PHU27111.1 4 LCDVCESAAAILFCAADEAALCHACDEKVH 33 7**************************998 PP
2	zf-B_box	26.7	1.2e-08	52	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 + + C+ +e+ ++ ++Ce +++ lC +C + H g H+ PHU27111.1 52 DVPHCDICENSPAFFYCEVDGSSLCLQCDMMVHVGgkrtHS 92 5689**************************99966566675 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MRTLCDVCES AAAILFCAAD EAALCHACDE KVHMCNKLAS RHVRVGLAKP NDVPHCDICE 60 NSPAFFYCEV DGSSLCLQCD MMVHVGGKRT HSRYLLLRQK VEFPGDKAGP TEELARKTLD 120 PGENKREYSH SPKPMVENNH QNQRVSPVLV SDGNADGHGK KDKMIDLNVK PSRFHGHASN 180 QRLIKIVMIL YAFVPFNSKK VTISVVLPPS V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	3e-76	DBB family protein