PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27103.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 334aa    MW: 36140.3 Da    PI: 6.4053
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.21.1e-18255289135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  PHU27103.1 255 CSHCGVQKTPQWRAGPMGAKTLCNACGVRFKSGRL 289
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDYVVGALKS SFMPETQLKM TQNMGYGDEF SAAGAGQNGV SGDDFFVDGL LDLSNGFAEG  60
EGEQEEEEEE KQQGGKDNSV HKLCPVSPQK KPEAVDAISV PVKEDFASLP VSEISVPEDD  120
LDSLEWLSHF VEDSFSGYSN AYPAGKLPVE KQSGVGENPV QEKCFETPVQ TKARTKRGRT  180
SVRVWPSGSG SLTESSSSST SSSSTTTMSS SPTAAWVLYP TPVYSAESPG KPLTKKLKKK  240
PAVHGGSVPQ QPRRCSHCGV QKTPQWRAGP MGAKTLCNAC GVRFKSGRLL PEYRPACSPT  300
FSSELHSNNH RKVLEMRRKK ESEESGLAHP VQIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-72GATA family protein