PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU27072.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 367aa MW: 40746.2 Da PI: 6.3171

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU27072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.5	6.4e-05	270	308	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L +l+ + +K + a++L++A+ YI+ Lq PHU27072.1 270 RKEKLGDRISALHRLVAPF-----GKTDTASVLTEAIGYIQFLQ 308 6778889999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MDSTNLHNHR QLQQQQQLSG YPFFAGVSTL HDWNSTMTSE EEYYYKGHMK RSIGTFPLMN 60 TSMFQDGHQL SNVQLDYKNN KAGCIISNDY FLKMKDMNGL SNNLFKESYF GNEQQHAFDL 120 NENLLSEDSY MNNAKTSIAF SGLAAAADAT NSSYISSNDM EHTDFQGLKL AYDGLTFKNS 180 ISGHDSNGNS FGHFSTDRMF ADGLPESAHS PSSNSSNKII ESNVSNTIGV SLKAKRSNYS 240 AEEEATPCQE ASKKPRVTSQ SSSTFMLKVR KEKLGDRISA LHRLVAPFGK TDTASVLTEA 300 IGYIQFLQDQ ILTLSMPYTK SSQGKLHHVD LKDSSIDTKC QPVLDLESRG LCLVPTSFTS 360 YITSSCD

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MDSTNLHNHR QLQQQQQLSG YPFFAGVSTL HDWNSTMTSE EEYYYKGHMK RSIGTFPLMN  60
TSMFQDGHQL SNVQLDYKNN KAGCIISNDY FLKMKDMNGL SNNLFKESYF GNEQQHAFDL  120
NENLLSEDSY MNNAKTSIAF SGLAAAADAT NSSYISSNDM EHTDFQGLKL AYDGLTFKNS  180
ISGHDSNGNS FGHFSTDRMF ADGLPESAHS PSSNSSNKII ESNVSNTIGV SLKAKRSNYS  240
AEEEATPCQE ASKKPRVTSQ SSSTFMLKVR KEKLGDRISA LHRLVAPFGK TDTASVLTEA  300
IGYIQFLQDQ ILTLSMPYTK SSQGKLHHVD LKDSSIDTKC QPVLDLESRG LCLVPTSFTS  360
YITSSCD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	4e-33	bHLH family protein