PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27036.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 263aa    MW: 28921.9 Da    PI: 8.5115
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.52.5e-20142176135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  PHU27036.1 142 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 176
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MMHRCSGSVV GPCSCGLFHS QTGTTTTTSS AFSMLFSHNH HTTFDHECSE NMYSFAPSSS  60
SVDCTLSLGT PSTRLTNLEN EKKLVYSNDQ RRRSSSKCMS NFWDILHPKQ HMATPSSAHK  120
STRGGSNGSN NSTTDPLVAR RCANCDTTST PLWRNGPRGP KSLCNACGIR FKKEERRASA  180
AAATANGGGG IETHQNLINS STTSWVHHQP QKMPCFSSAN YGNEFRFIED NDHHRDSDTA  240
GISFLPWRLS VADRPSLVHD FTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-56GATA family protein