PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU27000.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 194aa    MW: 21894.4 Da    PI: 8.4377
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU27000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.2e-191867255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++  +g+WvAeIr+p++   r+r +lg+f tae+Aa a+++a+++++g
  PHU27000.1 18 EYRGVRQRT-WGKWVAEIREPKK---RTRMWLGSFATAEQAAMAYDEAARRFYG 67
                69****999.**********965...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEKGPAGGKG GPQNAQCEYR GVRQRTWGKW VAEIREPKKR TRMWLGSFAT AEQAAMAYDE  60
AARRFYGPDA YLNLPHMRAN FNPLNKSKKF KWFSSSNVFT NSTGLLNLCA QPNVHIGQLK  120
RDDQQPDKSQ DRNISCFTDS GVSLKDDISV ANFYADNYNW DTMGAITGTA EASSFVDAYN  180
LNDELMYSSS IWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.11e-38ERF family protein