PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU26818.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 350aa MW: 39710.3 Da PI: 9.0358 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.7 | 6.6e-16 | 15 | 95 | 9 | 99 |
HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++ l++p f+ ++ +g +++ ++ + g+sW vk+ ++++ +++GW Fv++++L+ gD ++F+++g++ef v++f++ PHU26818.1 15 QKGFKHGLTIPTGFL-KYlKGR--DQIEHVVLRSGGKSWLVKV--KGCR----FKAGWAAFVEEHDLQLGDLLIFRHEGDMEF--EVSIFDS 95 4445556********.664555..5678888899*********..6666....9***********************999999..9999986 PP | |||||||
2 | B3 | 56.8 | 4.1e-18 | 240 | 322 | 3 | 88 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 + +p++ + s+ lv+p k a ++g+++++ l+++de+ rsW+vkl +++++++t+GW eF +an LkegD ++F+++++ PHU26818.1 240 YIVKPPYCFVSDSLVIPTKVALANGLSNKR-CGLIIRDERERSWNVKL--HSSGNSVYITGGWHEFRDANCLKEGDCIMFEVVSNG 322 5678999999**************666433.36999************..999999*************************87753 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 350 aa Download sequence |
MKIPPKKPHF FKPIQKGFKH GLTIPTGFLK YLKGRDQIEH VVLRSGGKSW LVKVKGCRFK 60 AGWAAFVEEH DLQLGDLLIF RHEGDMEFEV SIFDSSHCDR EYGEYLQEEE GCDIVEETSK 120 NFKFKGKSKL CIMSSSKEGD YMMFEVVANG EKPIWKFHRK EKKGQSVGGP SFALSNSACA 180 PSVPARNQAY SWKFEVKDKG SLESDRDADK PNPNIVSRRK AFPNEESATH SSFGKSHFVY 240 IVKPPYCFVS DSLVIPTKVA LANGLSNKRC GLIIRDERER SWNVKLHSSG NSVYITGGWH 300 EFRDANCLKE GDCIMFEVVS NGNTPIWKYN GKFFGNLRMP NITEATDRII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G00260.1 | 8e-27 | B3 family protein |