PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26757.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 354aa MW: 39649.7 Da PI: 6.2338

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	281	315	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ PHU26757.1 281 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 315 569*****************************885 PP
2	ELK	41.2	3.6e-14	235	256	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ PHU26757.1 235 ELKGQLLRKYSGYLGSLKQEFM 256 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MEGGSNGNNT SCLMMMGYGD HDTNNNNNNN SGSGTLCTPP MMMMMMPPPP TSLTNNNNAE 60 TSNNNHNILI LPFMDNNNPH EDHGNSSSSS TSSIKSKIMA HPHYPRLLAA YINCQKIGAP 120 PEVVARLEEL CATSAAMGRT SGGGGIVGED PALDQFMEAY CEMLTKYEQE LSKPFKEAMV 180 FLSRIECQFK ALTLAANSSH ESVAALGEAM DRNGSSDEEV DVNNGFVDPQ AEDRELKGQL 240 LRKYSGYLGS LKQEFMKKRK KGKLPKEARQ QLLDWWTRHY KWPYPSESQK LALAESTGLD 300 QKQINNWFIN QRKRHWKPSE DMQFVVMDAA HPHNYYMDNV LANHFPMDMT PSLL

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MEGGSNGNNT SCLMMMGYGD HDTNNNNNNN SGSGTLCTPP MMMMMMPPPP TSLTNNNNAE  60
TSNNNHNILI LPFMDNNNPH EDHGNSSSSS TSSIKSKIMA HPHYPRLLAA YINCQKIGAP  120
PEVVARLEEL CATSAAMGRT SGGGGIVGED PALDQFMEAY CEMLTKYEQE LSKPFKEAMV  180
FLSRIECQFK ALTLAANSSH ESVAALGEAM DRNGSSDEEV DVNNGFVDPQ AEDRELKGQL  240
LRKYSGYLGS LKQEFMKKRK KGKLPKEARQ QLLDWWTRHY KWPYPSESQK LALAESTGLD  300
QKQINNWFIN QRKRHWKPSE DMQFVVMDAA HPHNYYMDNV LANHFPMDMT PSLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	260	LKQEFMKKRK
2	257	261	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-136	TALE family protein