PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26555.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 202aa    MW: 23042.4 Da    PI: 5.2468
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.10.000184279755
                HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 +Er+RR+++ +++ eLr+l+ k            +i + A+ YI++Lq
  PHU26555.1 42 NAERKRRQKLSERLLELRSLMTKE-----------TIITDAITYIRELQ 79
                58*******************998...........89999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MEFPKSPFDD SHMSEEREVR GRTDKRKTID GEVKEYKSKN LNAERKRRQK LSERLLELRS  60
LMTKETIITD AITYIRELQT NVDDLSEQLL EMEATHAEQL ETKNEVIIDT AEDMGKWGIE  120
PEVQVAHIGP TKLWIKIVCQ KKRGGFTKLM ETMNVLGFDL NDTSVTASKG ALLVTASVEV  180
VRGGLNEANQ IREILLEIIR GI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14449ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.12e-30bHLH family protein