PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU26490.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 205aa    MW: 23033.2 Da    PI: 9.195
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU26490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.3e-102270655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                + +E++RR+++++ + +L +l+ ++  ++sk   s  + Le+A +YIk+Lq
  PHU26490.1 22 KTIEKNRRSQMKDLYMKLNSLVHHD--QHSKEfSSLPDQLEEAANYIKKLQ 70
                789*********************6..377779999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MEQPYGNKPT SSSLSCKTAD RKTIEKNRRS QMKDLYMKLN SLVHHDQHSK EFSSLPDQLE  60
EAANYIKKLQ IDLEKMRQKK EGLTAASTVN SRSMSNNNAG RTIIERTLPL PHIEIHIVDS  120
ALEVLLITGS DYHYMFNDII RMLHEDGVQV INASYTAVGD SIYHSIHSKV GESATYLSGY  180
GNAARISEKL KQFVGAAARL LPIKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.17e-41bHLH family protein