PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU26213.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 303aa MW: 33478.5 Da PI: 10.3668 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 25.8 | 2.6e-08 | 19 | 70 | 2 | 54 |
AP2 2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 +y+GVr +++ + + AeI p g++++++lg+++t+++Aa+ ++ a++ l+ PHU26213.1 19 RYQGVRKRRRVNGikYGAEIIKP---GQKRSIWLGTYDTEKKAAQVYDTAARWLK 70 699**8888766688****9998...557**********99*********98665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MAEIENDNAA MAVPPNTVRY QGVRKRRRVN GIKYGAEIIK PGQKRSIWLG TYDTEKKAAQ 60 VYDTAARWLK GPGAKLNFPH DDITEKAKDA SNELNPRNDV SNEGDKNNSN DIITDESSGT 120 ASSSKAGDIT STTKASRSAL RIREPIKNPQ APRSKSGGGA LKIREPMNQN PQAKAHSGAL 180 RIQEKNQNPQ APHFSVDIVS SSNAGVDVLR TREPNQNPQV PRFLVVNGGD APFQPTYLDK 240 FYMEILTRAR ILFPSRANFR KVTVDYLSDF HNHVGSTERV VQNQPPFTTA VYTELRLAPL 300 GSK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 24 | 28 | RKRRR |
2 | 25 | 29 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 5e-15 | ERF family protein |