PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU26147.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 382aa MW: 44626.1 Da PI: 8.2974

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU26147.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.3	6.4e-32	79	132	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ PHU26147.1 79 PRLRWTPELHRSFVQAIQRLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 132 8****************************************************7 PP
2	Myb_DNA-binding	49.3	1.2e-15	80	131	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v+a+++lGg t+k++ ++m+ g++ ++ks++q+y+ PHU26147.1 80 RLRWTPELHRSFVQAIQRLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 131 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MAENLVKQDH EEMMMIMENS SSSSIDLNED NKGESEEEEE EEVIEVEDSS EKETERISNY 60 NSCDVEKKNV RQYVRSKLPR LRWTPELHRS FVQAIQRLGG QERATPKLVL QMMNVRGLSI 120 AHVKSHLQMY RSKKLDESGQ VLGRGNNRGM QGRGYFFRNH LGGQRYNPIQ DFKMKNGAIV 180 LARNFNYDDH ALKGRFRNSF SRPPYQSKGI ISRYMQWSSD NQGGLCNTTK SLQGEDLLRM 240 KSWQTPRQAV IEENGIHEIV PIRSTQFLEQ KKWPPFIPNQ WEEKRADFCS AKNSHFLLQQ 300 NLGQPYSKWK YCRNNNALEQ NLVTPFTFEM KQDKSPLEEK DWLPDLQLRL SRSTEDKNES 360 NRRDQSDINT MLSLSLPTYS AT

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MAENLVKQDH EEMMMIMENS SSSSIDLNED NKGESEEEEE EEVIEVEDSS EKETERISNY  60
NSCDVEKKNV RQYVRSKLPR LRWTPELHRS FVQAIQRLGG QERATPKLVL QMMNVRGLSI  120
AHVKSHLQMY RSKKLDESGQ VLGRGNNRGM QGRGYFFRNH LGGQRYNPIQ DFKMKNGAIV  180
LARNFNYDDH ALKGRFRNSF SRPPYQSKGI ISRYMQWSSD NQGGLCNTTK SLQGEDLLRM  240
KSWQTPRQAV IEENGIHEIV PIRSTQFLEQ KKWPPFIPNQ WEEKRADFCS AKNSHFLLQQ  300
NLGQPYSKWK YCRNNNALEQ NLVTPFTFEM KQDKSPLEEK DWLPDLQLRL SRSTEDKNES  360
NRRDQSDINT MLSLSLPTYS AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-35	G2-like family protein