PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25504.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 360aa    MW: 39428.7 Da    PI: 8.5239
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25504.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer107.86.2e-3464121359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v YkeClkNhAaslG+havDGCgEf+ps++++ +++++lkCaACgCHRnFHRre+ee
   PHU25504.1  64 VVIYKECLKNHAASLGTHAVDGCGEFLPSPSSNtADPTSLKCAACGCHRNFHRREPEE 121
                  589***************************999899*******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MDLTNNNNAT ATTTTTTTTV KTPEGEIETP AQIQKVKPFP LSNGVLKRKN TLHHQHHQHH  60
HPVVVIYKEC LKNHAASLGT HAVDGCGEFL PSPSSNTADP TSLKCAACGC HRNFHRREPE  120
EPVVVPPPPI ATAVLEYQPH HRHHPPPPPP LPLPLPPRGG DHSSPNSPSP PPISSAYYPA  180
SAPHMLLALS AGFTGEKNPN PTSAPLVANS NGRKRFRTKF TPDQKVKMLE FSESVGWKMQ  240
KRDEDLVNNF CNEIGIEKGV LKVWMHNNKN TFGKKSDQHT SGEDNNNNLS HNNGNSTNNN  300
VNGFCIVSRN NSHNNTNSEF HHHHHHGQSN SDNKKDIQGI IHQLHTSDSV VATNGSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.19e-59ZF-HD family protein