PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU25501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 330aa MW: 36936.1 Da PI: 5.288 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.5 | 3.1e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +v+++G+g+W++++ + g++R+ k+c++rw +yl PHU25501.1 14 KGPWTPEEDIMLVSYVQEHGPGNWRAVPTKTGLRRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.8 | 1.6e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ ++++ +++G++ W++Ia++++ Rt++++k++w+++l PHU25501.1 67 RGNFTDQEEKTIIQLQALFGNK-WAAIASYLP-ERTDNDIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MGRLPCCDKV GVKKGPWTPE EDIMLVSYVQ EHGPGNWRAV PTKTGLRRCS KSCRLRWTNY 60 LRPGIKRGNF TDQEEKTIIQ LQALFGNKWA AIASYLPERT DNDIKNYWNT HLKKKLKKFQ 120 LDQCSGSDDH LFYVENGLTH LSSSNSRGQW ERTLQTDINM AKKALHNALS LENSTSPLIN 180 IKQENPQVSS STYASSTENI SRLLQGWMRS STSENSKTSS NNIATNDSSS CDGTPNAESK 240 GGMGLMEAFE SLFGLESFES SSSDEFSQTT SPQAEATKVE IKKEENENVE APAVPLSIIL 300 ENWLLDENTL NIQAKDDLTT FSFDETAPLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 4e-95 | MYB family protein |