PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU25416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 99aa MW: 10833.1 Da PI: 9.9748 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 23 | 73 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++ GVr+++ +grWvAeI+d ++ r++lg+f+t eeAa+a+++a+ +l+g+ PHU25416.1 23 RFAGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTSEEAARAYDEAACSLRGA 73 688******.7*********33....35*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
MKTHDDNGNV ADAAAGAQQP RKRFAGVRQR PSGRWVAEIK DTIQKIRVWL GTFDTSEEAA 60 RAYDEAACSL RGASTRTNFW PCSSSSTSAL PPKILMFSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-31 | ERF family protein |