PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25403.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 332aa MW: 37859.6 Da PI: 4.8454

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.9	3.7e-13	30	112	10	98
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++++rl++p f +++ ++ ++ + le +sg++Wev + + + g+++l++GWk+F + + g f++F ++ rs f +v++f+ PHU25403.1 30 SHELCRLRIPEGFSSRYCKNMLNP--VFLEVPSGEVWEVDV--EHSEGHIWLAQGWKDFSDYYSISHGHFLIFGYNARSHF--NVTIFD 112 56789**********5454444..***********..999999************************999999..999987 PP
2	B3	53.9	3.3e-17	234	316	4	90
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 + +s+vl+ + l++p kfa ++ +++ s l+l+ + sW+vk+i+ +k+ + t GWk Fv +n+Lk gD++v++++++++ PHU25403.1 234 FMHTSYVLRPHSLYIPLKFAMKYLMQN--SGNLVLRVPGRGSWSVKCIILRKDAK--VTCGWKAFVLDNKLKYGDVCVLEVINDTKL 316 5779*****************6663..447***********88777766..79*******************9887444 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MVNKFRRKIG EASSISNITQ PKFGKIIFSS HELCRLRIPE GFSSRYCKNM LNPVFLEVPS 60 GEVWEVDVEH SEGHIWLAQG WKDFSDYYSI SHGHFLIFGY NARSHFNVTI FDLSAAEVDY 120 PIAEIESDDS IDISDVVEHS SENLSRGPLI EEGERKRQEG ETEDDDLQTN VIEEEESQGN 180 VVSPEISEVY KEHEQQTKIV TSESESEAER DQEIAENYQR AKAFKSKNPF IISFMHTSYV 240 LRPHSLYIPL KFAMKYLMQN SGNLVLRVPG RGSWSVKCII LRKDAKVTCG WKAFVLDNKL 300 KYGDVCVLEV INDTKLSLIE VTIFPGVSDS TN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	4e-37	B3 family protein