PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25387.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 683aa MW: 75582.7 Da PI: 6.5413

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25387.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	496	533	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV +WF N R + PHU25387.1 496 FEHflHPYPSDADKHLLARQTGLSRNQVANWFINARVR 533 664559******************************88 PP
2	BELL	108.9	3e-35	358	428	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r ++q++k kLls+l+e +krY++y+eq+q+v++sF+ v+g g+a pYt+lA+ka+SrhF+cLk ia q+ PHU25387.1 358 RLDHQRRKFKLLSMLDEAYKRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFKCLKGGIAAQL 428 6789****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MSQDYPDQSL ASFSSGFERL QDEEQQQQQH IAHQIHREKL RVEGLESPLS LVGVEEEGES 60 SGIQVYETDG MLSEMFNFQT TATASSATEL LQNQLSHNYR RPNQVPHHHQ EQPPNTHLGN 120 EWFANQQVVV VGGSLQVPFG DAKDHVDAKV LSNHDSVTAH YQRQHNQVPR TYTAESMQLF 180 LMNPHPRSAS QSPSRPTSSN LQGFPSPATG GHFGQFICGG ASTSNSVGGV NVIEGQGLSL 240 SLSSTLQHLE ANKVEELRMS GGGEMLFYNQ ESQNHRQFHH IGYGSSLGLV NVLRNSKYAK 300 AAQELLEECC SVGRGQLFKK TNKVSKNNNT KSASNPSGSK NNPSFSKDNP PNLSASDRLD 360 HQRRKFKLLS MLDEAYKRYN HYCEQMQMVV NSFDLVMGFG AAVPYTALAQ KAMSRHFKCL 420 KGGIAAQLKQ SCELLGEKDA STSGLTKGET PRLKVLEQSL RQQRAFQQMG MMEQEAWRPQ 480 RGLPERSVNI LRAWLFEHFL HPYPSDADKH LLARQTGLSR NQVANWFINA RVRLWKPMVE 540 DMYQREAIED DDDMQNQNST TNAQTPTSNI ITNSNTQTFA SDEKSPSNDA PENDPSIVAL 600 NSHISSSMPT QTTNFPTIQD SDDTLPRGGA VSGGGEYGTT NVANNSEIGS TMIRFGTAVA 660 GDVSLTLGLR HAGNLPEDTH FFG

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MSQDYPDQSL ASFSSGFERL QDEEQQQQQH IAHQIHREKL RVEGLESPLS LVGVEEEGES  60
SGIQVYETDG MLSEMFNFQT TATASSATEL LQNQLSHNYR RPNQVPHHHQ EQPPNTHLGN  120
EWFANQQVVV VGGSLQVPFG DAKDHVDAKV LSNHDSVTAH YQRQHNQVPR TYTAESMQLF  180
LMNPHPRSAS QSPSRPTSSN LQGFPSPATG GHFGQFICGG ASTSNSVGGV NVIEGQGLSL  240
SLSSTLQHLE ANKVEELRMS GGGEMLFYNQ ESQNHRQFHH IGYGSSLGLV NVLRNSKYAK  300
AAQELLEECC SVGRGQLFKK TNKVSKNNNT KSASNPSGSK NNPSFSKDNP PNLSASDRLD  360
HQRRKFKLLS MLDEAYKRYN HYCEQMQMVV NSFDLVMGFG AAVPYTALAQ KAMSRHFKCL  420
KGGIAAQLKQ SCELLGEKDA STSGLTKGET PRLKVLEQSL RQQRAFQQMG MMEQEAWRPQ  480
RGLPERSVNI LRAWLFEHFL HPYPSDADKH LLARQTGLSR NQVANWFINA RVRLWKPMVE  540
DMYQREAIED DDDMQNQNST TNAQTPTSNI ITNSNTQTFA SDEKSPSNDA PENDPSIVAL  600
NSHISSSMPT QTTNFPTIQD SDDTLPRGGA VSGGGEYGTT NVANNSEIGS TMIRFGTAVA  660
GDVSLTLGLR HAGNLPEDTH FFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-137	TALE family protein