PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25377.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 854aa MW: 95517.2 Da PI: 9.6929

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25377.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.2	9.3e-16	25	109	4	94
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 + ps+v++ +l++ kfa+++ +++ + l+l + sW+v + + +sg +GWk Fv +n+Lk+gD+++F++++ + l+v PHU25377.1 25 FMQPSYVSTPFNLSIALKFARKYFLENDG--NLVLHVPGRGSWSVIC--TIGSGNAKVHSGWKAFVLENELKVGDVCIFEVIKGAQ--LFV 109 6789*****************777545..6***********..99999999*********************886433..344 PP
2	B3	51.6	1.7e-16	279	366	5	96
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + ps+v++ +l ++ +fa+++ +++ + l+l + + sW+vk+ + +s+ +GWk Fv +n+Lk+gD++vF++++ + v++ PHU25377.1 279 MQPSYVSRPYILNISSTFARKYFLENDG--NLVLCVPGSGSWSVKY--TICSKNAKVHSGWKAFVIENKLKVGDVCVFEVSKGAQLFVDVTI 366 679999999***********777545..6***********..888888899********************7654443345555 PP
3	B3	46.2	8.4e-15	542	631	5	98
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + ps+v+k +l+++ fa ++ ++k + +l+l+ + sW+vk+ + + ++ ++ WkeFv++n+Lk gD++vF+l++ ++ + v++fr PHU25377.1 542 MQPSYVSKPYNLRISFLFAWKYFLEK-C-GDLVLRVPGRGSWSVKY--DLGVSAARIQFTWKEFVQDNKLKIGDVCVFELIKGTQPIFDVTIFR 631 67999**99*******9885.4.38***********..555555556666*****************997665556777776 PP
4	B3	42.6	1.1e-13	724	803	13	94
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 + rl++ + a+++ ++ ++++ l++ +++ +W vk++ + +++GW eFv +n+Lk+gD++vF+ +rse ++v PHU25377.1 724 QMRLIIMLSVARKFFSSRHSEVVLQVSSKREIQWAVKCTLGIS--NAKFSAGWMEFVLDNNLKVGDVCVFEWANRSELLFNV 803 4788999999999977777888899999999*****55333..45599*******************76666654444 PP

Sequence ? help Back to Top
Protein Sequence Length: 854 aa Download sequence
MDKESSTAYQ KAKAFKSKNP FIISFMQPSY VSTPFNLSIA LKFARKYFLE NDGNLVLHVP 60 GRGSWSVICT IGSGNAKVHS GWKAFVLENE LKVGDVCIFE VIKGAQLFVD VKIFHAAGST 120 LMHNIVGEIP VGSDSKSKVI LIDNSGLCSR PKVVHIEKLK LQTKGSCDLS SKIKEEHGEG 180 TEIDHSAEIL GHYSSGQSSK RNRLEVDSED DAVEYPQEHV ASPSLTRNTK KSGGSCGMHK 240 QQSKISYDKN KKAMDKERAI AYQRAKAFKS KSPFIICFMQ PSYVSRPYIL NISSTFARKY 300 FLENDGNLVL CVPGSGSWSV KYTICSKNAK VHSGWKAFVI ENKLKVGDVC VFEVSKGAQL 360 FVDVTIFRAA GSTLMHNIVE EASGGSDSKS KFIKTDNSVP CIQPKAVQNE KLKQKTGGSY 420 DLNSKIKEEH GEGTEMEHSI KILGRCPLGH GSKRKRHEGE AEDDVSIGIH TKSIKVEKSL 480 EDVASPSFTR KPKKSGESCR MHKQQTEMVY AVNMTVLGKE RTRAYQRAKA FKSKNPFVIY 540 FMQPSYVSKP YNLRISFLFA WKYFLEKCGD LVLRVPGRGS WSVKYDLGVS AARIQFTWKE 600 FVQDNKLKIG DVCVFELIKG TQPIFDVTIF RGAENKSMHK IDEGVSNCDN KMVKIENSVP 660 CSQPKIVHRR KLNLEKKQKE ELSEGTVIAK EMVMAYQKAK SFTSTNPFFI CVMHPSYVSP 720 ARGQMRLIIM LSVARKFFSS RHSEVVLQVS SKREIQWAVK CTLGISNAKF SAGWMEFVLD 780 NNLKVGDVCV FEWANRSELL FNVIIFPSAE GSIFVTLTTC RELSLFDSIC FLASCLSDLD 840 IIFTTLLLSQ SKSL

Sequence ? help Back to Top

Protein Sequence Length: 854 aa Download sequence

MDKESSTAYQ KAKAFKSKNP FIISFMQPSY VSTPFNLSIA LKFARKYFLE NDGNLVLHVP  60
GRGSWSVICT IGSGNAKVHS GWKAFVLENE LKVGDVCIFE VIKGAQLFVD VKIFHAAGST  120
LMHNIVGEIP VGSDSKSKVI LIDNSGLCSR PKVVHIEKLK LQTKGSCDLS SKIKEEHGEG  180
TEIDHSAEIL GHYSSGQSSK RNRLEVDSED DAVEYPQEHV ASPSLTRNTK KSGGSCGMHK  240
QQSKISYDKN KKAMDKERAI AYQRAKAFKS KSPFIICFMQ PSYVSRPYIL NISSTFARKY  300
FLENDGNLVL CVPGSGSWSV KYTICSKNAK VHSGWKAFVI ENKLKVGDVC VFEVSKGAQL  360
FVDVTIFRAA GSTLMHNIVE EASGGSDSKS KFIKTDNSVP CIQPKAVQNE KLKQKTGGSY  420
DLNSKIKEEH GEGTEMEHSI KILGRCPLGH GSKRKRHEGE AEDDVSIGIH TKSIKVEKSL  480
EDVASPSFTR KPKKSGESCR MHKQQTEMVY AVNMTVLGKE RTRAYQRAKA FKSKNPFVIY  540
FMQPSYVSKP YNLRISFLFA WKYFLEKCGD LVLRVPGRGS WSVKYDLGVS AARIQFTWKE  600
FVQDNKLKIG DVCVFELIKG TQPIFDVTIF RGAENKSMHK IDEGVSNCDN KMVKIENSVP  660
CSQPKIVHRR KLNLEKKQKE ELSEGTVIAK EMVMAYQKAK SFTSTNPFFI CVMHPSYVSP  720
ARGQMRLIIM LSVARKFFSS RHSEVVLQVS SKREIQWAVK CTLGISNAKF SAGWMEFVLD  780
NNLKVGDVCV FEWANRSELL FNVIIFPSAE GSIFVTLTTC RELSLFDSIC FLASCLSDLD  840
IIFTTLLLSQ SKSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-19	B3 family protein