PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25372.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 404aa    MW: 46139.3 Da    PI: 8.412
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25372.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.64.5e-13201021299
                 HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  ++ +++p  f++eh+  k   kt  l++ +g sWe k+ ++ +s  ++ ++ W +F + ++ ++gD+++F+l+++s+f  +v +++k
  PHU25372.1  20 YTNKIRMPGAFVKEHK--KMLAKTCLLKTDEGLSWEAKI-VKETSHYFMCEGDWPRFLQHHKFESGDMLIFYLVEKSTF--HVLLYSK 102
                 4566899********7..457889***************.5666666999999********************987888..8877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MSMDPNNNHP SFSKLLQQGY TNKIRMPGAF VKEHKKMLAK TCLLKTDEGL SWEAKIVKET  60
SHYFMCEGDW PRFLQHHKFE SGDMLIFYLV EKSTFHVLLY SKKSLTNIRH FEELSSSDEE  120
EAAEEKGEVK NVEASRKANK VKMEPVQLSY LGDKSDSKAD NMLGVEKKAN EVKMEPVILS  180
DSEEERVDPS SDWGNPCYWH PGGKSNAKAD NMLGVKKKAP VKIFRELIEL SDSEEETVDP  240
FPGSKEVGNT WCSHPGYKFN GKADNMINVK KKALWTKEAK KAAKDPNKHK MPARCSFVKR  300
GWKSARDPNK PKKPAGAFFL FMKDFRKQFK EENPKDISLA AGGEKWKQLS DAEKAPYMAE  360
VKKRMEEYYK NKAAYNRRVA AGDSEEEESY KSKSEVDEEE GGDD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1312327KKPAGAFFLFMKDFRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-08B3 family protein