PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25252.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 282aa MW: 32575.1 Da PI: 8.9702

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142.5	2.4e-44	39	165	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+++yLk+ ++++kl+ ++i ++iy ++Pw+Lp +k +e+ewyfF++ ++k+ + ++nr+t++g+Wkatg+d+++ s ++ PHU25252.1 39 PGFRFHPTEEELINFYLKRLIDDNKLDS-NIIGFLNIYLSDPWELPGLAKPGEREWYFFVPINRKHGPKGKPNRTTRNGFWKATGSDRPIRSYldPKKI 136 9***********************99.89***********8888899*********************************998878889 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfy grapkg++tdWvm+eyrl PHU25252.1 137 IGLKKTLVFYGGRAPKGSRTDWVMNEYRL 165 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MSAKLDKSFG LYKRLLNLCS HKHPVREKKK MSPAELELPG FRFHPTEEEL INFYLKRLID 60 DNKLDSNIIG FLNIYLSDPW ELPGLAKPGE REWYFFVPIN RKHGPKGKPN RTTRNGFWKA 120 TGSDRPIRSY LDPKKIIGLK KTLVFYGGRA PKGSRTDWVM NEYRLPDEHK DHDIVLCKVY 180 RKATSFKELE QRATVEEDAA KTYMPTPHES QDILGSLESS KNDMHFKSCE EENYHTTLTL 240 PQLSGSNAFV EPSKFSIDSL SSPLWTELQN AGQDFWSLFS LS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	8e-80	NAC family protein