PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU25199.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family SRS
Protein Properties Length: 358aa    MW: 38965.7 Da    PI: 7.4115
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU25199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702222.77.3e-691342813154
      DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101
                  g++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpaakrrerqqql a+++ +++++++++skr+re+   ++s+l s++l+s+++   le
  PHU25199.1 134 GGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLMALQQGHNNNNNNNKSKRQRED--PSTSSLVSSRLPSTTTG--LE 228
                 5789*****************************************************9999999999999999987..78899999999999765..89 PP

      DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                 + ++P++vs++a+f+c+++ss+dd+e++laYq+avsigGhvfkGiLydqG e+
  PHU25199.1 229 VGKFPAKVSTSALFQCIQMSSIDDAEDQLAYQAAVSIGGHVFKGILYDQGHES 281
                 999***********************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MANFFSLGAG SGNQEQQQQQ EISSCHRSNN HNPAVPTEIS QESWFLYRND HNNQEIPTTY  60
KGFELWQSDT TTQHQPEQNQ HQQQHQFRHP IYPLQDFYST AVGLGVGPSR SGFDLSAGDH  120
EASRSGFMMM RSGGGGISCQ DCGNQAKKDC QHMRCRTCCK SRGFQCQTHV KSTWVPAAKR  180
RERQQQLMAL QQGHNNNNNN NKSKRQREDP STSSLVSSRL PSTTTGLEVG KFPAKVSTSA  240
LFQCIQMSSI DDAEDQLAYQ AAVSIGGHVF KGILYDQGHE SQYNNMSAAG GDTSSGGSAG  300
VQNHHNSTAV ATAITSGGAG TAVGPTEASN FHDPSLFPAP LSTFMVAGTQ FFPPSRSP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202207KSKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66350.11e-67SRS family protein