PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25143.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 292aa MW: 33500.6 Da PI: 6.5281

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25143.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	78.9	8e-25	50	138	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 fqr wsee ei++LqG +++ ++++ps++ af fvk+ ++ + +k+ql K+ rLK+K+k++ +k +fsk+hd+k f+ls+kiWg PHU25143.1 50 FQRAWSEEEEIAILQGHLNYSFLNNSEPSSNYGAFLTFVKDDLQTETNKTQLQHKLTRLKRKYKRNIEK------RKFSKSHDEKLFKLSEKIWG 138 9****************************************************************99......89***************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MAARNIFKSL KAKRPHGDSD KEWTPSPEDC ETYSPEEVIM ESCNVNKSGF QRAWSEEEEI 60 AILQGHLNYS FLNNSEPSSN YGAFLTFVKD DLQTETNKTQ LQHKLTRLKR KYKRNIEKRK 120 FSKSHDEKLF KLSEKIWGDK TSGKMIVDAS RSEMSWDFVL NGGTAADLED WFRRNPRQLI 180 SEKERNEMLE KSQSLNDYPN SMVTLLFIGD GNLATFDAGK FGLRRGIPGS SELQPEEDIL 240 LPCVVQIAHF RATRNRQESP GLKITECVLE AFRVENEDLE PSTRRTVSAV SH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-17	GeBP family protein