PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU25074.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 506aa MW: 55392.9 Da PI: 6.269

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU25074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.7e-16	81	125	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW++eE++++++a +++G W++I +++g ++t+ q++s+ qk+ PHU25074.1 81 RERWSEEEHKKFLEALRLHGRA-WRRIEEHVG-TKTAVQIRSHAQKF 125 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MQLMECRVGL DHGLTEIIVK TDTGSRQQLI YRDQSESDTT PPSRSRISLA VGARIQLEEQ 60 VTPAEEYAPK IRKPYTISKQ RERWSEEEHK KFLEALRLHG RAWRRIEEHV GTKTAVQIRS 120 HAQKFFSKVV RESNNGDASS VKSIEIPPPR PKRKPMHPYP RKMATPVKSG TLAPGKLKSS 180 TSPDLCLSEP EDQSPTTVLS ALGSFAFGTV HSSKPSEHSS PVSSDVAENS GDVVLSEPSD 240 IILEERRSSP ARGYASSNQD NQSCMKLDLF PEDNDFVKEG LDEASSTQCL KLFGKTVLVT 300 DSYKPSSTCG EILLTDENDE PASPTLPQSS VPTKYLRWGS ECARSTSTIG LPAQSYYIPA 360 PNGSSGPNQS TTSPLLPWGS SYVSDKFPCA KVHSPIPIKG CPLFNETGLD DKETQKEGSS 420 TASNAESADV ESSGDTNLEI EAQSGNGNLV VVSVRVSVPP LFERRANFTK RVEGFVPYKR 480 CLAEGGISSS TITGEEREEQ RTRLCL

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MQLMECRVGL DHGLTEIIVK TDTGSRQQLI YRDQSESDTT PPSRSRISLA VGARIQLEEQ  60
VTPAEEYAPK IRKPYTISKQ RERWSEEEHK KFLEALRLHG RAWRRIEEHV GTKTAVQIRS  120
HAQKFFSKVV RESNNGDASS VKSIEIPPPR PKRKPMHPYP RKMATPVKSG TLAPGKLKSS  180
TSPDLCLSEP EDQSPTTVLS ALGSFAFGTV HSSKPSEHSS PVSSDVAENS GDVVLSEPSD  240
IILEERRSSP ARGYASSNQD NQSCMKLDLF PEDNDFVKEG LDEASSTQCL KLFGKTVLVT  300
DSYKPSSTCG EILLTDENDE PASPTLPQSS VPTKYLRWGS ECARSTSTIG LPAQSYYIPA  360
PNGSSGPNQS TTSPLLPWGS SYVSDKFPCA KVHSPIPIKG CPLFNETGLD DKETQKEGSS  420
TASNAESADV ESSGDTNLEI EAQSGNGNLV VVSVRVSVPP LFERRANFTK RVEGFVPYKR  480
CLAEGGISSS TITGEEREEQ RTRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	6e-47	MYB_related family protein