PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24991.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 348aa    MW: 39180.2 Da    PI: 7.9326
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.6e-09193240455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  PHU24991.1 193 SHSLAERARREKISKKMKYLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 240
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MLRCGEMSVL ERQRIVLERL YNHSKQQLSS LPQQDLAHFN NLITGHMMSG GCVEENFTNF  60
DMFGGREHKG FAGSNFVTNN NCQEMARPSF STVSNSSITT VSPHPEKENY PSTVVTPREN  120
VVSTKKRKAE FYVEEDCITK RPEGKTGEVH SEITEKSQRG VTGNDSKENS KTSEVQKPDY  180
IHVRARRGQA TDSHSLAERA RREKISKKMK YLQDLVPGCN KVTGKAGMLD EIINYVQSLQ  240
KQVEFLSMKL ATLNPRLDLI TDNFFTKNLP SYIATTFPPT VALPTLSEYN MIQHQQGSSG  300
DVAQMLPQRR DLMSFPEAFL GSSPLTVVQQ QQPTFEPDLQ SLFSVGFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18300.25e-55bHLH family protein