PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24712.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 350aa    MW: 38647 Da    PI: 7.9183
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.5e-192475156
         AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                +++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a+++a++ l+g+
  PHU24712.1 24 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDQAARTLRGA 75
                6799******.7*********....4456*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MKQPAPQPSD GIRARRKPSS RGHPRFVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTAED  60
AARAYDQAAR TLRGANARTN FELPASDPHQ GSSILENSEP FNFEEACRTD EPENGLVGAL  120
KAKLFNSKNS RSFIQAYASN TNCQLVSKTK PSVPILEIKK TASQTGQAEK LRKRGHTTHV  180
NSIGQGKNYS ENLFSGNHNL DYISLMRNDC QPVISSSQCQ NNQWDRGTNS AIMWVNEQGR  240
LPWEEPQMSR GHNEVSFSTT NNYTNTDIFG GGNSTTACTW PVSVSEPTVN LSTFGEADVL  300
NGPMMMPHMN GLTQTASVPI EQQLLQFETG LWGAGENATW DPFLLSSVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-18ERF family protein