PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU24359.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 359aa    MW: 39053.8 Da    PI: 6.5634
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU24359.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.85.2e-17247281135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  PHU24359.1 247 CLHCASDKTPQWRTGPMGPKTLCNACGVRYKSGRL 281
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MEASDFFVSG FFSHAGDEQN PNNNNCNNNN NSNGNNFIVD ELLDFPNEDE VMADAFFDSI  60
TGNNSADSST VTVVDSCNSS VSGGDAQFNG NLSCRSFTDA PFPTSELCVP YDQVAELEWL  120
SNFVEESFSS DDLQNLQFVP VPNVNSTTQT TDSSSSATTI STGISSPLVF PADTSVPGKA  180
RSKRSRAAPC DWSSRLKLLL SPATSSSDSN NNNNAGSAAN NNAAFTGKAS KAPSRKRENV  240
EVPGRKCLHC ASDKTPQWRT GPMGPKTLCN ACGVRYKSGR LVPEYRPASS PTFISAKHSN  300
SHRKVLELRR QKELHRVQQV HHHQHQLLSQ PTIFGVSNGG DEFLLHHHQN CGPNFRHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-70GATA family protein