PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23929.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 530aa MW: 57628.5 Da PI: 8.0281

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.5e-12	234	282	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++ + Lr ++P++ ++K +Ka+ L +++eYI+ Lq PHU23929.1 234 RSKHSATEQRRRSKINDR-HMLRGIIPNS----DQKRDKASFLLEVIEYIHFLQ 282 889*************.89***9....9****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MSVVHANKEG GYLKTHDFLQ PLEQAEMTSR KEDTKVEVVA VERPSPPLAA TPSGEHTLPG 60 GIGTFSISYL HQRVPKPEAS LFSVAQASST DRNDENSNCS SYTGSGFTLW DESAVNKGKT 120 GKENSGGDRH ILREAGVNTG GVHPTTSLEW QSQSSSNHKH NTAALSSLSS AQQSSPLKSQ 180 NFLHMITSAK NAQDDDDDED EDCVIKKEPQ SHPRGNVSVK VDGKGNDQKP NTPRSKHSAT 240 EQRRRSKIND RHMLRGIIPN SDQKRDKASF LLEVIEYIHF LQGKVHKYEE SYQGWDNEPL 300 KLPLSKCHRT THGVSNHPQC TINASGAAVP YARKFDESVM AISSANPINV QKLEPNISST 360 SLKENGQQPG LTNKATALPM HPNTFSFCGT NSTAALHSSK LMADTDKLES KSHSEFSLSR 420 SHMTDYAIPN TNPKGQALSI ESGTISISSA YSQGLLNTLT QALQNSGVDL SQANISVQID 480 LGKRANGRVN SSASTIKGDD VSTSNQPTPQ SRVTTTREDS DQAFKRRKTS

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MSVVHANKEG GYLKTHDFLQ PLEQAEMTSR KEDTKVEVVA VERPSPPLAA TPSGEHTLPG  60
GIGTFSISYL HQRVPKPEAS LFSVAQASST DRNDENSNCS SYTGSGFTLW DESAVNKGKT  120
GKENSGGDRH ILREAGVNTG GVHPTTSLEW QSQSSSNHKH NTAALSSLSS AQQSSPLKSQ  180
NFLHMITSAK NAQDDDDDED EDCVIKKEPQ SHPRGNVSVK VDGKGNDQKP NTPRSKHSAT  240
EQRRRSKIND RHMLRGIIPN SDQKRDKASF LLEVIEYIHF LQGKVHKYEE SYQGWDNEPL  300
KLPLSKCHRT THGVSNHPQC TINASGAAVP YARKFDESVM AISSANPINV QKLEPNISST  360
SLKENGQQPG LTNKATALPM HPNTFSFCGT NSTAALHSSK LMADTDKLES KSHSEFSLSR  420
SHMTDYAIPN TNPKGQALSI ESGTISISSA YSQGLLNTLT QALQNSGVDL SQANISVQID  480
LGKRANGRVN SSASTIKGDD VSTSNQPTPQ SRVTTTREDS DQAFKRRKTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	3e-70	bHLH family protein