PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU23622.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 104aa MW: 11668.9 Da PI: 5.8925 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 60.6 | 3.4e-19 | 27 | 82 | 46 | 101 |
NF-YC 46 llskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 +s a e+fi+elt+ sw hae++k rtl+k++i++a+ + if f+ divprde+ PHU23622.1 27 QFSMAFEVFIMELTVPSWFHAEDKKHRTLQKNNISNAIRLSGIFHFICDIVPRDEI 82 5999**************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
MENNSHQSRA NAAAAAQSDH LLEQQQQFSM AFEVFIMELT VPSWFHAEDK KHRTLQKNNI 60 SNAIRLSGIF HFICDIVPRD EINEEAMAHK TARGGSSGQD NTDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 5e-21 | NF-YC family protein |