PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23307.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 375aa MW: 42865.5 Da PI: 6.8198

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H PHU23307.1 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	16.5	2.5e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H PHU23307.1 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	22.3	3.3e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+Cp Cgk Fs nL++H++tH PHU23307.1 136 YVCPheGCGKAFSLDFNLRSHMKTH 160 99**********************9 PP
4	zf-C2H2	16.3	2.7e-05	166	191	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 + Cp Cgk++ + + Lk+Hi++ H PHU23307.1 166 HICPypECGKRYAHEYKLKNHISStH 191 679999****************9988 PP
5	zf-C2H2	16.1	3.1e-05	228	253	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+Cp C+ks+ + + L+ H+r+ H PHU23307.1 228 YSCPyeGCDKSYIHEYKLNLHLRNmH 253 99*********************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MESQITHHLY ERRPIYKSKA PATKWFKEWV PQDVVATGGK CSLLKWVNEA TLKGLKEKPK 60 EPGVPVPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDYVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PECGKRYAHE 180 YKLKNHISST HQKNTPDAPK YTPPVEKPVK TPKSTPATYG SSSSERPYSC PYEGCDKSYI 240 HEYKLNLHLR NMHPGHLPDD NAKNAQSTAD NEMDEGSDQD TYAARRGNGR IQKQSRPKPS 300 LKQPPLKVAR KGSSSAASQA NLTISKKPWP LKEENYNEED SEETEEERER ERDDVGEGWR 360 YGENDDDDEE TEEDD

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MESQITHHLY ERRPIYKSKA PATKWFKEWV PQDVVATGGK CSLLKWVNEA TLKGLKEKPK  60
EPGVPVPEPE PTTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS  120
SKLKRHFLIH TGERDYVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY PECGKRYAHE  180
YKLKNHISST HQKNTPDAPK YTPPVEKPVK TPKSTPATYG SSSSERPYSC PYEGCDKSYI  240
HEYKLNLHLR NMHPGHLPDD NAKNAQSTAD NEMDEGSDQD TYAARRGNGR IQKQSRPKPS  300
LKQPPLKVAR KGSSSAASQA NLTISKKPWP LKEENYNEED SEETEEERER ERDDVGEGWR  360
YGENDDDDEE TEEDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-135	C2H2 family protein