PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23210.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 356aa    MW: 38722.3 Da    PI: 6.177
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.8e-13132182255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r +h  +Er+RR+++N+ ++ Lr+l+P     ++k+ + a+i   +v+YI++Lq
  PHU23210.1 132 RISHITVERNRRKQMNEHLSVLRSLMPCF---YAKRGDQASIIGGVVDYINELQ 182
                 889*************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MDGDQNLSDL FEDSECDIFS ILDALEGGGG GGGGGGSYSE FNNNNTTITI TTTTTTTTTS  60
DEITGLVSEE GRKRKLVSQK STRSSATLQE YSEETDQADT PSSKRQNFAG VTSCGIIEGN  120
NTNNNNNQQE NRISHITVER NRRKQMNEHL SVLRSLMPCF YAKRGDQASI IGGVVDYINE  180
LQQVLQSLEA KKQRKVYSEV LSPRLIPISP RVPSPLSPRK PPLSPRMNLP ISPRTPQPTS  240
PYKPNHHNRP AAPITSSNSS IDSHVNNELA ANSKSAIADV EVKFSGANVI LKTVSPRIPG  300
QAVKIMAALE ELALEILHVS ISTIDGTMLN SFTIKIGIEC QLSAEELAHQ IQQTFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.11e-86bHLH family protein