PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU23031.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 420aa MW: 47481.1 Da PI: 5.3208

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU23031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	68.7	9.5e-22	108	161	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k +l+Wt LH+rF+eav++L G kA P++il lm+++ Lt +v+SHLQkYR PHU23031.1 108 KSKLVWTDFLHNRFLEAVTKL-GLAKAYPRRILALMDIPELTKGNVASHLQKYRH 161 679****************.9*****************************6 PP
2	Myb_DNA-binding	25.5	3.1e-08	110	160	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT ++ ++++av++lG +++I + m +t ++ s++qky+ PHU23031.1 110 KLVWTDFLHNRFLEAVTKLGLAkaYPRRILALMDiPELTKGNVASHLQKYR 160 678***************999********99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MYAVMSADEK ESTVTKEIEN GVVCFILKPI SQDDVRDLWK YAIKRKKTMN IGKSVIEVQE 60 NANEKSPHEV IVAESSSSVN EESNKKGKSG KKNERDKNQD NFSTTSKKSK LVWTDFLHNR 120 FLEAVTKLGL AKAYPRRILA LMDIPELTKG NVASHLQKYR HYLKKVTTPV NSNPQLISNL 180 SEISFDNVNQ LYTRKAVNNV STHQLLNDAA TSNQQLMIGN LNDVADVETD LQRTDQMKKQ 240 FSDMLAFYSS QKHHNIKFEN MKTSDLSIGD ITQEASIQLP PLPEHFVSTG VGPEEGDTAL 300 IDFSMLDNSY PTPNSTVHST SVFDSQFKVQ SSNMVKYNIE EGTNLNFIDG NNDPYQQVCL 360 TWADHILPEQ ENYGEISTED ISFQFCNAPL NLELEQGNYR GVATEESTFH LHYVSPEFKS

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MYAVMSADEK ESTVTKEIEN GVVCFILKPI SQDDVRDLWK YAIKRKKTMN IGKSVIEVQE  60
NANEKSPHEV IVAESSSSVN EESNKKGKSG KKNERDKNQD NFSTTSKKSK LVWTDFLHNR  120
FLEAVTKLGL AKAYPRRILA LMDIPELTKG NVASHLQKYR HYLKKVTTPV NSNPQLISNL  180
SEISFDNVNQ LYTRKAVNNV STHQLLNDAA TSNQQLMIGN LNDVADVETD LQRTDQMKKQ  240
FSDMLAFYSS QKHHNIKFEN MKTSDLSIGD ITQEASIQLP PLPEHFVSTG VGPEEGDTAL  300
IDFSMLDNSY PTPNSTVHST SVFDSQFKVQ SSNMVKYNIE EGTNLNFIDG NNDPYQQVCL  360
TWADHILPEQ ENYGEISTED ISFQFCNAPL NLELEQGNYR GVATEESTFH LHYVSPEFKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01760.1	2e-25	ARR-B family protein