PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU23025.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 384aa    MW: 43137.6 Da    PI: 4.5715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU23025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18214264155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GVr++  +g+Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+++l+g
  PHU23025.1 214 SVYRGVRQRN-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAALALRG 264
                 78*****999.7******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MMEPIVMVFV VLLVELEELV VMVFVVLWVE LEKWVELEEL AVIMPSVLWS EIMKSVVTIS  60
DMMRAKLMEQ VVIVHIVLPT KMMNLILMVS NVLEVQLMKS VVMAELIEQF VIVPAVLWAE  120
MTKSILMVLD VLELELMKSI VMVPEGLQAE LRKLIPKLLD SFVLWALLID SGPLIEFSSS  180
SSLSSSFSDE EVMLASNNPK KPAGRKKFRE TRHSVYRGVR QRNSGKWVCE VREPNKKSRI  240
WLGTFPTAEM AARAHDVAAL ALRGRSACLN FADSTWRLPI PTSSNSKDIQ KAAAEAVESF  300
RPSESEGVSG ESADSSSPQT PESVFFMNEE VPKSRFFMDE EALFFMPGLL ANMAEGLTLP  360
PPQCGEFGDH VEVDSYMPLW NYSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-62ERF family protein