PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22997.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 479aa    MW: 54179.9 Da    PI: 8.6788
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.94.5e-1925115199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffkv+   d + ++ l +p kfa++ ++   ++++  led+sgr+W+v++  +k++g+  +++GW eF ++++Lk+g+f+vF+++ ++ f   v++f +
  PHU22997.1  25 FFKVM--IDKSFLKVLHFPPKFARSVSHL--TDQKTYLEDSSGRRWRVRV--CKHGGSLAIKQGWPEFSSEHDLKVGEFLVFHYVPDKHF--IVQIFGT 115
                 89999..677777789*********9765..4568***************..********************************987888..9999976 PP
2B3322.1e-103984741594
                 -EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3  15 rlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                  l lp +   +h  ++ k++ + + l+ ++ r W v +    +s+  vlt GWk+ + a gL+ g  ++F+l++  ++e+ +
  PHU22997.1 398 FLELPESWR-KHllKKAKQGRMIIFLRGPDKRIWPVFY--HSRSRFNVLTCGWKQVAAAYGLNPGNECLFQLVD--QRECIF 474
                 566777775.6668667778899999************..999999*************************986..344445 PP
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    
MQRENKACDG CKDCRLIHGK GVISFFKVMI DKSFLKVLHF PPKFARSVSH LTDQKTYLED  60
SSGRRWRVRV CKHGGSLAIK QGWPEFSSEH DLKVGEFLVF HYVPDKHFIV QIFGTSACEK  120
IKFCSDVGKG RKRARTYLEA TNPVELLQTT AIDSVKKKSR LSAALESEKA TYKPNIVNFA  180
VNVDTVTEKG WSVHSAIHVD ESFCVIDKNT QYDQEDNRLC LHLSSFEMPA SKPVEEGISS  240
PLKGNNGNDN HVDTNSRSKT EPNLNLENKK LNSEALLSQL EAGIKATNMV SRPAEDVPPL  300
AEDIPPLGPK YKNSYEVSQF PREPRVIKLE EAREARVIKK ELEDIATEAF SPARAIHGGE  360
YANGNQKVIK CEPADSRDAP SLNAVNYSCL LEIDGRDFLE LPESWRKHLL KKAKQGRMII  420
FLRGPDKRIW PVFYHSRSRF NVLTCGWKQV AAAYGLNPGN ECLFQLVDQR ECIFDVRKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.12e-11B3 family protein