PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU22897.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 246aa MW: 27869.8 Da PI: 8.3259 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.2 | 5.4e-12 | 72 | 124 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 rr h +Er+RR+++ ++ Lr+llP ++K s ++ +Av+YIk++q PHU22897.1 72 RRIIHRDIERQRRQEMSALYSSLRSLLPLqY---IKGKRSVSDHMHEAVNYIKEMQ 124 6888*************************66...********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MFSLQGCSDN DLLIQILSNP CQQSKISQDQ VMDYASLEAI HTHPPNINAQ KKRQPKRKIG 60 NDENASDDFK LRRIIHRDIE RQRRQEMSAL YSSLRSLLPL QYIKGKRSVS DHMHEAVNYI 120 KEMQANIKEL EKRKDLLVKS SPLPNSIQRE TENGSTNSFI DCTVTVSPCH CGIQISLSVD 180 CKGKCFPLSK LLQELLKQGL NVVNCVSANA NQRSLYTIQT EACDMNNVDH LALQQKVTDM 240 ANSKDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 9e-42 | bHLH family protein |