PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22683.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 154aa    MW: 17380 Da    PI: 6.5961
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000162648123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C  C++ F++   L  H++ H
  PHU22683.1 26 YECVFCKRGFNTAQALGGHMNIH 48
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MNLSTHDHQE VDQQKQQDNI GVGRSYECVF CKRGFNTAQA LGGHMNIHRK DRIRINRPNQ  60
NQNNGRYHAA AAHVNFRTYF PAYSSTSTTS PFLMNGPDSG SEDHNNTQQC LNLFGDDWRM  120
SLSLQFGAHA VETMETNKGT GDDLDLELRL GHDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.12e-13C2H2 family protein