PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22610.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 197aa    MW: 22568.4 Da    PI: 8.221
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding409.1e-133479148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg++T eE e  ++  ++lG++ W++Ia +++ gRt+ ++k++++++l
       PHU22610.1 34 RGPFTMEEVETVIKTYQELGSR-WSAIATKLP-GRTDTEVKNFFHTHL 79
                     89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MLRVPQQQQQ KGLSRTGKSC RLRWMNYLHP DVKRGPFTME EVETVIKTYQ ELGSRWSAIA  60
TKLPGRTDTE VKNFFHTHLK KHLGLKNYDA QLKTRKGHKQ TQENEKENST QGRLVLETIN  120
SSSSLSPDVC SPCSSTITCK ENQMTDQFTN FSLLVDQQVS EGENTNIQPC FIPSGSTFST  180
FDQFDMNSFW FDVLGNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16490.12e-35MYB family protein