PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU22330.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 245aa    MW: 27657.5 Da    PI: 8.5959
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU22330.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.11.8e-1458104354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 r+h+e+E+rRRdriN  +++Lr+l+P++     +K++Ka+ L  +++++k+L
  PHU22330.1  58 RSHSEAEKRRRDRINAQLSTLRKLIPTS-----EKMDKAALLGSVIDHVKDL 104
                 78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDNSICSEYW PQTDDLNQDS LFLLPQIPNI TSFQLQNYPF YFPECSESFQ ERTASASRSH  60
SEAEKRRRDR INAQLSTLRK LIPTSEKMDK AALLGSVIDH VKDLKGRSTE ISKVLNTPTD  120
IDEVTIEHLN EEENIGSASA SKRKDSVILK ASFSCNDRPE LFSELKRAIK NLKLTVMEAD  180
ITSLGGRIKG IFVLCPGENS AKDVCMNSLK HSLRVVLCRI AITPSTSNNR IKSKRQRFFL  240
PAQFS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232237KSKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.19e-43bHLH family protein