PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU22315.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 167aa MW: 19714.1 Da PI: 6.6798 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.6 | 6.6e-21 | 4 | 65 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+p+++++++++++l +++ ++V++WFqN++a+e++ PHU22315.1 4 KCGRWNPTAEQVKVLTDLFRSgLRTPTTDQIQKISSQLsfygNIESKNVFYWFQNHKARERQ 65 568*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 113.2 | 1.3e-36 | 4 | 67 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yG+ie+kNVfyWFQN+kaRerqk+ PHU22315.1 4 KCGRWNPTAEQVKVLTDLFRSGLRTPTTDQIQKISSQLSFYGNIESKNVFYWFQNHKARERQKR 67 678***********************************************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 167 aa Download sequence |
MGTKCGRWNP TAEQVKVLTD LFRSGLRTPT TDQIQKISSQ LSFYGNIESK NVFYWFQNHK 60 ARERQKRRRK VLLDEPINHI EDTIQLNNVS SSKHFQEIST TNRESDQADR VIETLQLFPL 120 HSLSEYSDTE KLRLFTEEYM RDNMTFSCTL EAEMDHPTLD LRLSFFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G11260.1 | 9e-55 | WOX family protein |