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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU22112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 404aa MW: 45498.9 Da PI: 6.4303 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.3 | 3.3e-09 | 301 | 348 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHU22112.1 301 SHSLAERARREKISKKMKYLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 348 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 404 aa Download sequence |
MPGRSTTEAI HLVRRLVEQY RERKKDLHMV FIDLEKAYDK VPREVLWRCL EVSGVPLAYI 60 RAIKDMYDRA KTQVRTAGGD SEHFTVLTGL HQGSTLSPFL FALVMDVLTR RIQGEVPWCS 120 PEASFKGLLG VASALGCELL TSLLVDFFFL LKDKDSHSSF RTSPVETWDI CVAVFALELL 180 PVTIYWGPID NAIWSSPRSE SISVATSVSW EAEASCTWFE VNREEMLTAC PSVDGTVLFY 240 VEEDCITKRP EGKTGEVHSE ITEKSQRGVT GNDSKENSKT SEVQKPDYIH VRARRGQATD 300 SHSLAERARR EKISKKMKYL QDLVPGCNKV TGKAGMLDEI INYVQSLQKQ VEFLSMKLAT 360 LNPRLDLILY THILASNNSN ETNNVTKNEE CNIGDEEKKA GLRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18300.1 | 1e-50 | bHLH family protein |