PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU22102.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 360aa MW: 41223.2 Da PI: 5.2272

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU22102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.9	5.1e-36	48	139	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+++++++sw++ g+sfvv+d++ f++ +Lp++Fkh+n++SFvRQLn+YgF+k++ e+ weF+++ F kg+k+ll++ik PHU22102.1 48 FLTKTYEMVDDSTIDHIVSWNRGGQSFVVWDPHAFSTMLLPRFFKHNNYSSFVRQLNTYGFRKIDPER---------WEFANEAFLKGNKQLLRNIK 135 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k+ PHU22102.1 136 RRKT 139 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MMNNNPLYSV KEEYPGSSSG GDGGEPPPST MMTPQPMEGL HDIGPPPFLT KTYEMVDDST 60 IDHIVSWNRG GQSFVVWDPH AFSTMLLPRF FKHNNYSSFV RQLNTYGFRK IDPERWEFAN 120 EAFLKGNKQL LRNIKRRKTP NSQSLPTAQA LGPCVELGRF GFDGEADRLR RDKHVLMMEL 180 VKLRQNQQNT RAYLRSLELR LQGTERKQQQ MMNFLARAMQ NPEFIQQIIQ QKGKRKEIEE 240 AITKKRQRPI DQGSSSSTLH VGGSSHSIKS EPLEFGETSG FQVSELEALA LEMQGFGRAR 300 RDQQEDMTER LEQFGYTDKE LDAGFWEELF NEEVVSENED GEEEGVNVLA ERLGFMDSSP

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MMNNNPLYSV KEEYPGSSSG GDGGEPPPST MMTPQPMEGL HDIGPPPFLT KTYEMVDDST  60
IDHIVSWNRG GQSFVVWDPH AFSTMLLPRF FKHNNYSSFV RQLNTYGFRK IDPERWEFAN  120
EAFLKGNKQL LRNIKRRKTP NSQSLPTAQA LGPCVELGRF GFDGEADRLR RDKHVLMMEL  180
VKLRQNQQNT RAYLRSLELR LQGTERKQQQ MMNFLARAMQ NPEFIQQIIQ QKGKRKEIEE  240
AITKKRQRPI DQGSSSSTLH VGGSSHSIKS EPLEFGETSG FQVSELEALA LEMQGFGRAR  300
RDQQEDMTER LEQFGYTDKE LDAGFWEELF NEEVVSENED GEEEGVNVLA ERLGFMDSSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	4e-99	HSF family protein