PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU21892.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 757aa MW: 86342.2 Da PI: 6.5049

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU21892.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.8	2.4e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + it+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ ++ +w++t +++ HnHel PHU21892.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGITRRDFTCHRGGYPQLKPSEDGKLQRNRKSSRCGCQAFMRIVNRAdfnVPEWRITGFSNVHNHELL 152 6*************999887455667****************9***************98887676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MTEITNIANE TSENGTDSSQ DDIGTVEEMP EDTILSRQTS VNLVPFIGQR FVSQDAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QLKPSEDGKL QRNRKSSRCG 120 CQAFMRIVNR ADFNVPEWRI TGFSNVHNHE LLRSTEVQLI PAYCTMSPDD KSRICMFAKA 180 GMSVRQMLRL MELEKGVKLG CLTFTEVDVR SLLQSFRNVD QDNDPIDLLK LCKEMKDKDP 240 KFKYDYKIDC NNRLEHIAWS YASSMRLYEA FGDAIVFDTT HRLDAYDMLL GIWIGVDNHG 300 SLCFFGCVLL REESLQSFSW ALKTFLGFMN GKAPGTILTD QNLWLKEAIA TEIPRAKHAF 360 CIWNIISRFS DWFSTLLGSQ YDNWKAEFHR LYNLHSIEEY EVGWNEMVET YRMDGNKHIA 420 SLYALRSYWA LPFLRSFFFA GMTSTFQSET MNTYIQRILS AQSVLDNFVE QVARVVDAKD 480 QAGAKHKVLR NVQKVFLKTG SPIESHAATV LTPYAFSKLQ EELVFAPQYA SLMVDESYFV 540 VRHHKEMDGG YKVLWVPHDE FISCSCHNFE FTGILCRHVL RVLSTNNCFH IPDQYLPMRW 600 REVTSSLAKS TLFTLPSDHM GKLQLLQSMI STLINESVET EERLNVVCDE VSTVLSRIKG 660 FPTASNGGNG IAYASPSDSL ILAEVEESEG IGQSFTCNPH ECINLSKLKE RGSRDGLDLY 720 GKRRRFSIPC CGQYGHDAND CPMMEGEDLN GDRLGFL

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MTEITNIANE TSENGTDSSQ DDIGTVEEMP EDTILSRQTS VNLVPFIGQR FVSQDAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGITRR DFTCHRGGYP QLKPSEDGKL QRNRKSSRCG  120
CQAFMRIVNR ADFNVPEWRI TGFSNVHNHE LLRSTEVQLI PAYCTMSPDD KSRICMFAKA  180
GMSVRQMLRL MELEKGVKLG CLTFTEVDVR SLLQSFRNVD QDNDPIDLLK LCKEMKDKDP  240
KFKYDYKIDC NNRLEHIAWS YASSMRLYEA FGDAIVFDTT HRLDAYDMLL GIWIGVDNHG  300
SLCFFGCVLL REESLQSFSW ALKTFLGFMN GKAPGTILTD QNLWLKEAIA TEIPRAKHAF  360
CIWNIISRFS DWFSTLLGSQ YDNWKAEFHR LYNLHSIEEY EVGWNEMVET YRMDGNKHIA  420
SLYALRSYWA LPFLRSFFFA GMTSTFQSET MNTYIQRILS AQSVLDNFVE QVARVVDAKD  480
QAGAKHKVLR NVQKVFLKTG SPIESHAATV LTPYAFSKLQ EELVFAPQYA SLMVDESYFV  540
VRHHKEMDGG YKVLWVPHDE FISCSCHNFE FTGILCRHVL RVLSTNNCFH IPDQYLPMRW  600
REVTSSLAKS TLFTLPSDHM GKLQLLQSMI STLINESVET EERLNVVCDE VSTVLSRIKG  660
FPTASNGGNG IAYASPSDSL ILAEVEESEG IGQSFTCNPH ECINLSKLKE RGSRDGLDLY  720
GKRRRFSIPC CGQYGHDAND CPMMEGEDLN GDRLGFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein