PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU21104.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 324aa    MW: 36292.3 Da    PI: 10.1225
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU21104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind375.68.7e-11513241301
   GAGA_bind   1 mdddgsre..rnkg.yye...pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla 92 
                 md++g+r+  r+k+ + +   ++ +s+k     q+m+++aerda+i+ernlalsekkaa+aerdma lqrd+a+aern+a++erdn++++l+++e s+ 
  PHU21104.1   1 MDESGNRDnsRHKPpQGQwlmQHqPSMK-----QIMAIMAERDAAIQERNLALSEKKAALAERDMAILQRDSAIAERNNAIMERDNAIATLQYRESSM- 93 
                 8888887777888732222222234455.....************************************************************99984. PP

   GAGA_bind  93 salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak.kkkkksekskkkvkkesader.. 186
                     +g q+++g+k++++ qq +++ +++ +++++ r+ +++ea p++  a+e ++ +++k+ +++k +  +k+  k+ kk + ++++ ++     +  
  PHU21104.1  94 ----SGGQIVRGVKHMQHPQQhVHHqQHMVEPTYNPRDVHINEAIPVSPPAPEPTKPRRNKRAKEPKAAPCPKKApKASKKVKRETEDLNQT----Tfs 184
                 ....5778************964555889999999*************99999888887776666554322222212222222222222222....022 PP

   GAGA_bind 187 .........................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKm 260
                                           k ++k++dl+ln+v++De+t+PvPvCsCtG+lr CYkWGnGGWqS+CCtt++S+yPLP+++++r+aRi+grKm
  PHU21104.1 185 ksqewkgaqemaggasddlnrqlavPKPDWKDQDLGLNQVAFDETTMPVPVCSCTGVLRPCYKWGNGGWQSSCCTTNLSMYPLPAVPNKRHARIGGRKM 283
                 234578999***************99************************************************************************* PP

   GAGA_bind 261 SqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 S++af+klL++LaaeG+dlsnpvDLk+hWAkHGtn+++ti+
  PHU21104.1 284 SGSAFTKLLSRLAAEGHDLSNPVDLKNHWAKHGTNRYITIK 324
                 ****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDESGNRDNS RHKPPQGQWL MQHQPSMKQI MAIMAERDAA IQERNLALSE KKAALAERDM  60
AILQRDSAIA ERNNAIMERD NAIATLQYRE SSMSGGQIVR GVKHMQHPQQ HVHHQQHMVE  120
PTYNPRDVHI NEAIPVSPPA PEPTKPRRNK RAKEPKAAPC PKKAPKASKK VKRETEDLNQ  180
TTFSKSQEWK GAQEMAGGAS DDLNRQLAVP KPDWKDQDLG LNQVAFDETT MPVPVCSCTG  240
VLRPCYKWGN GGWQSSCCTT NLSMYPLPAV PNKRHARIGG RKMSGSAFTK LLSRLAAEGH  300
DLSNPVDLKN HWAKHGTNRY ITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-122BBR-BPC family protein