PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU21081.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 906aa MW: 101435 Da PI: 5.4734

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU21081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.5	3.2e-29	588	639	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l+ l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ PHU21081.1 588 AEKTITLQILQQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 639 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 906 aa Download sequence
MDESVIPSNS LLTTPSDYLM DLDYMDGLLL EGCWLETADG SEFLQHSPAM FNAPFDSSFM 60 WPTTIDANNV EFNGIPSKDA QQEKQRPSFT ENMSINHSQE LSYAKVQPFG ENMNNAMCTS 120 GLSENHLVEA PELNKRWWIG PKASSSVMDR LIWALGHIRD CSRDKGILLQ LWVPINRDGR 180 RVLSTTNQPF LLDLNCPQLA NYREVSANYQ FPANEDSKEI VGLPGRVFAD KVPEWTPDVR 240 FFRSEEYPRV EHAQLYDVRG TLAVPVFEQG SRSCLGVIEV VMTKQKIKYR SELESVCEAL 300 KAVDLSTSEV STIQDAKVCD LSYQAALPEV LEVLMSACET HGLPLAQTWV PCVQQGKGGC 360 RHSEENLIHC VSTEDSACYV ADPRVQGFHE ACSEHHLLKG QGVVGKAFMT NQPCFSDDLT 420 SYSKSEYPLS HYAKMFGLQA AVAIRLRSTL TGSSDFVLEF FLPADCRNPE EHRKMLTSLS 480 IIIQNVCRTL RVVTDKELQE ETVSMDEVAN HTVEQHKEHT ETSQERTSWT SCDAEFQESS 540 VISAFQDEKP DELMRKDAME FRHHKDAGSG IGASRNMGRT GDRRRAKAEK TITLQILQQY 600 FAGSLKDAAK SIGVCPTTLK RICRQHGIKR WPSRKIKKVG HSLQKIQRVI DSVEGASGTL 660 QIESFYSNFP ELASPNASRM SPLANSKLNE HPMALNTQQE GCITSPNNAD VSKSPSSSCS 720 RSSSSSQCCS SGTKPQSHPL NTCDEDQIIQ EESVDNSMKR VRSEPELLHL SSEGPKTIPR 780 SQSHACVAEN PKSEKKGPSI SQEEAPRVKV TYGEEKIRFR MQNSWRYSDL LREITRRFGI 840 DDPSGLQLKY LDDDSEWVLL TCDADLEECI DVCMSSQNQM IKLILVQDSQ HHFGSSFGSS 900 SPILVQ

Sequence ? help Back to Top

Protein Sequence Length: 906 aa Download sequence

MDESVIPSNS LLTTPSDYLM DLDYMDGLLL EGCWLETADG SEFLQHSPAM FNAPFDSSFM  60
WPTTIDANNV EFNGIPSKDA QQEKQRPSFT ENMSINHSQE LSYAKVQPFG ENMNNAMCTS  120
GLSENHLVEA PELNKRWWIG PKASSSVMDR LIWALGHIRD CSRDKGILLQ LWVPINRDGR  180
RVLSTTNQPF LLDLNCPQLA NYREVSANYQ FPANEDSKEI VGLPGRVFAD KVPEWTPDVR  240
FFRSEEYPRV EHAQLYDVRG TLAVPVFEQG SRSCLGVIEV VMTKQKIKYR SELESVCEAL  300
KAVDLSTSEV STIQDAKVCD LSYQAALPEV LEVLMSACET HGLPLAQTWV PCVQQGKGGC  360
RHSEENLIHC VSTEDSACYV ADPRVQGFHE ACSEHHLLKG QGVVGKAFMT NQPCFSDDLT  420
SYSKSEYPLS HYAKMFGLQA AVAIRLRSTL TGSSDFVLEF FLPADCRNPE EHRKMLTSLS  480
IIIQNVCRTL RVVTDKELQE ETVSMDEVAN HTVEQHKEHT ETSQERTSWT SCDAEFQESS  540
VISAFQDEKP DELMRKDAME FRHHKDAGSG IGASRNMGRT GDRRRAKAEK TITLQILQQY  600
FAGSLKDAAK SIGVCPTTLK RICRQHGIKR WPSRKIKKVG HSLQKIQRVI DSVEGASGTL  660
QIESFYSNFP ELASPNASRM SPLANSKLNE HPMALNTQQE GCITSPNNAD VSKSPSSSCS  720
RSSSSSQCCS SGTKPQSHPL NTCDEDQIIQ EESVDNSMKR VRSEPELLHL SSEGPKTIPR  780
SQSHACVAEN PKSEKKGPSI SQEEAPRVKV TYGEEKIRFR MQNSWRYSDL LREITRRFGI  840
DDPSGLQLKY LDDDSEWVLL TCDADLEECI DVCMSSQNQM IKLILVQDSQ HHFGSSFGSS  900
SPILVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein