PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU20944.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 425aa MW: 46405.3 Da PI: 9.344 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.7e-05 | 180 | 202 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 Cp Cg++F+ ++L++H+ + H PHU20944.1 180 ACPECGEVFPKIESLEHHQAVkH 202 6******************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MALLTFSAEN NQKNQPTKRR KKQQKQNKEK QKQPSSWDQF KNLLTCKQIE NSTVHDPAAS 60 KNNNPSSSTA AAYSKLSSCS SICNFRDVVH GNTRVVHRAD NSPESSSLGQ ETRLLSKNKT 120 SHHGPSSSSS RSLAKSNGGG SSTYTTSSRG MQFRKLSGCY ECHMIVDPSR YPLPRSTICA 180 CPECGEVFPK IESLEHHQAV KHAVSELGPE DSSRNIVEII FKSSWLKKDN PICKIERILK 240 VYNTKRTIQR FEDCRDTVKI HAVTTGKKNP RCAADGNELL RFYCTSLTCS LGARGSSSLC 300 GSVPGCGVCT TIRHGFQGNK ISGVRTTASS GRAHDCLGSG TARRRAMIVC RVIAGRVKQT 360 KDVVTSPTME EENCSTSGSG SDSGSTAYDS VAGYAGIYSN LEELYVFNPR AILPCFVVIY 420 EALES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75710.1 | 1e-160 | C2H2 family protein |