PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20860.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 266aa    MW: 29387.1 Da    PI: 8.2883
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.2e-18631421499
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 +++ +pkkfa++    ++ +  ++l+ +sg +W+v+l  +  +++ +l++GWkeFv+a+ L+e D ++Fk++g s+f   v+vf++
  PHU20860.1  63 CIFAIPKKFANNLR--EKLGDSVSLTGPSGATWNVRL--TLIGDALFLKDGWKEFVDAHSLEEDDLLIFKYNGLSRF--DVSVFDR 142
                 7899******5444..457779***************..889999**************************988999..9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MSFWEILDEV VRGVPSAEKP FIEGDFNGHI GSLSRARCTK LPLCAMSGEK PHHKGLLYTA  60
LPCIFAIPKK FANNLREKLG DSVSLTGPSG ATWNVRLTLI GDALFLKDGW KEFVDAHSLE  120
EDDLLIFKYN GLSRFDVSVF DRQSLCEKEA SCFVKKCEHA DVASRSRKKS HTPREYSSRD  180
VSEAPPTKKP KLAATLTSED TSKSSSHDEY EPPEKKKTLA STSTSADTNE SSSHNECEPP  240
TEKKTTLAST STSRTRSARA NAKLRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-26B3 family protein