PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHU20856.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 200aa MW: 22381.9 Da PI: 6.5162 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.5 | 3.1e-10 | 38 | 76 | 58 | 99 |
EEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 58 ryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +l++GWkeFv+a+ L+e D ++Fk++g s+f v vf++ PHU20856.1 38 ALFLKDGWKEFVDAHSLEEDDLLIFKYNG-SRF--DVLVFDR 76 5799**********************988.788..8888887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 200 aa Download sequence |
MSIWEILDEV VRGVLSAEKP FIEGDFNGHI GLTLIGDALF LKDGWKEFVD AHSLEEDDLL 60 IFKYNGSRFD VLVFDRQSLC EKEASCFVKK CEHADVASRS RTKRHTPREY SSRDVYEAPP 120 TKKRKLAATP TSEDTSKSFS HDEYEPPAKK KTLASTSTSA DTNESSSHNE CEPPTEKKTT 180 LASTSTSRTR SAQANAKLRS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 99 | 104 | RSRTKR |
2 | 122 | 151 | KKRKLAATPTSEDTSKSFSHDEYEPPAKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G33280.1 | 2e-17 | B3 family protein |