PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20706.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 265aa    MW: 28267.5 Da    PI: 8.4075
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20706.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0015102124123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ Cgk F +   L  H  +H
  PHU20706.1 102 YKCSVCGKGFGSYQALGGHKASH 124
                 9*********9999998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MALEALNSPT GTPTPPPFQF ESNGQQLRYI ENWRKGKRSK RSRSMEHQPT EEEYLALCLI  60
MLARSGGSVN HQRSLPPPAP VMKLHAPSSS SVAEEEKEKM VYKCSVCGKG FGSYQALGGH  120
KASHRKLVPG GGNGGDDQST TSTTTNATGT TTSVNGSGNR SGRTHECSIC HKCFPTGQAL  180
GGHKRCHYDG GIGNGNANSG VSASVGVTSS EGVGSTVSHR DFDLNIPALP EFWLGFGSGE  240
DEVESPHPAK KSRLCLPPKY ELFQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.11e-37C2H2 family protein