PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20642.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 382aa    MW: 41804.6 Da    PI: 6.6772
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20642.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.1e-10225273355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  PHU20642.1 225 NSHSLAERVRRERISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 273
                 58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MGSKENGSFN CPSTGMNRAD SMPNVDPYSG FGWDPLLSMN QKGGFKGSSV VGHNEFANLP  60
YQSSHFAHYP SDSNLAEMVP KIPPFGNESF SELVNTFPLQ EQLRGANCYA NFVKNRGIAT  120
EGECQISGED AVEVSPNGKR KMSENHSLSN ANKNVEGELQ KAPSRDSSDC SKEQDGGKRH  180
KTDQNVSPNL RSKQAGKQVK DDSDGGEPPK DNYVHVRAKR GQATNSHSLA ERVRRERISE  240
RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEL NFDIDRILSK  300
EMLHQQTSNA ALLGLGPGLT SSLPFPGISH GSFTGIPATT PPFHPLPQNA WDNELQSLLQ  360
MGFDSTSSLN NMGPNGRSKL DL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-64bHLH family protein