PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20531.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 278aa    MW: 30832.1 Da    PI: 8.8118
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.17.5e-16189223133
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33 
                 C++Cgt++  Tp++Rrgpdg +tLCnaCGl ++ k
  PHU20531.1 189 CTHCGTSSnnTPMMRRGPDGRRTLCNACGLTWANK 223
                 *******99***********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MNCQTQGMNV DSHFSGASEE VPGGGDEVIG NFPAGIDGGV GGVKVMMPNY TVYSASDVTL  60
HNGEANFDQL TLSFRGRIYV FDGVPTQKVQ LVFQLLGGYE YSPGTQALGL SSASQKDYVD  120
NPVHCADPKR LESLLRFYEK RKKRCYEKKI RYGIRQEVAY RMERKNGLFA RKGSTKPKEE  180
NIPPEETWCT HCGTSSNNTP MMRRGPDGRR TLCNACGLTW ANKFQHPFLS LLYTASVAFF  240
GTVSWMKITA TLTTELLHVP SLIKFLRQPA SDSSVMAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.19e-40GATA family protein