PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20475.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 209aa    MW: 23113.7 Da    PI: 10.6904
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66.3e-104389354
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                ++h  +Er+RR+riN  +++L++l P +     +K +K  +L++Av  +k+L
  PHU20475.1 43 VTHAVAERKRRERINGHLHTLKKLFPYL-----PKKDKPRVLTEAVTQLKEL 89
                68*************************8.....6999999***999988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MLSSLQGCNG FLQHQVLVDH QRKNGDGKSS SNTKKNKSKD SAVTHAVAER KRRERINGHL  60
HTLKKLFPYL PKKDKPRVLT EAVTQLKELR KNIAQQLELS SLFIPSENDV VIVNYCDNEE  120
RTVKTTVCCE DRPALNRDIS SAIRSVQGRV VKAEMATVGG RTKAEMVVVL AKANGGEKDV  180
ALLKRALKAV VENRALGLGS SMILGRRFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14954ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.11e-29bHLH family protein